C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156054 Stx16-005 ENSMUSG00000027522 10090 + 2:174077066-174096967 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLungOvaryENSMUST00000156054
Transcript ID Adrenal Kidney Lung Ovary
ENSMUST00000156054 8.007±0.00 7.332±0.00 9.279±0.00 9.466±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000696 CIL_000696_0003 CGP 2:174076308-174123070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0031201 IEA SNARE complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355957 STX16-004 protein_coding Homo_sapiens 4e-28 132
ENST00000358029 STX16-010 protein_coding Homo_sapiens 0 736
ENST00000359617 STX16-018 protein_coding Homo_sapiens 0 719
ENST00000361770 STX16-201 protein_coding Homo_sapiens 7e-29 132
ENST00000361830 STX16-202 protein_coding Homo_sapiens 0 662
ENST00000371132 STX16-001 protein_coding Homo_sapiens 1e-27 130
ENST00000371141 STX16-002 protein_coding Homo_sapiens 0 813
ENST00000464640 STX16-005 nonsense_mediated_decay Homo_sapiens 6e-29 132
ENST00000467096 STX16-003 nonsense_mediated_decay Homo_sapiens 8e-29 132
ENST00000468590 STX16-012 processed_transcript Homo_sapiens 0 614
ENST00000493301 STX16-015 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000496003 STX16-014 processed_transcript Homo_sapiens 0 462
ENST00000530122 STX16-NPEPL1-001 nonsense_mediated_decay Homo_sapiens 0 813

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