C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and calponin homology (CH) domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031734 Lrch4-001 ENSMUSG00000093445 10090 + 5:137629121-137641094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031734
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031734 8.067±1.15 15.935±1.47 4.533±0.00 4.438±0.88 16.409±5.46 16.411±3.90 5.902±1.79 11.543±1.12 3.774±0.46 18.464±2.40 4.577±0.66 11.215±1.69 5.264±3.03 35.457±14.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TF CIL_0000TF_0002 CGP 5:137629121-137642899

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310300 LRCH4-001 protein_coding Homo_sapiens 0 2097
ENST00000467201 LRCH4-003 retained_intron Homo_sapiens 0 606
ENST00000470184 LRCH4-008 retained_intron Homo_sapiens 0 255
ENST00000476881 LRCH4-005 retained_intron Homo_sapiens 0 507
ENST00000485554 LRCH4-012 protein_coding Homo_sapiens 0 401
ENST00000485583 LRCH4-007 retained_intron Homo_sapiens 0 512
ENST00000487697 LRCH4-009 retained_intron Homo_sapiens 0 202
ENST00000490359 LRCH4-011 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000497245 LRCH4-002 protein_coding Homo_sapiens 0 1775
ENST00000619071 LRCH4-201 protein_coding Homo_sapiens 0 985

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