C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: polyhomeotic homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467570 PHC3-002 ENSG00000173889 9606 - 3:170102567-170181749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000467570
Transcript ID Testis
ENST00000467570 4.766±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PJ CIL_0001PJ_0001 CGP 3:170037929-170181749
CIL_0002XN CIL_0002XN_0001 CGP 3:170086732-170305981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA:IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0015629 IDA actin cytoskeleton
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129817 Phc3-202 protein_coding Mus_musculus 0 2543
ENSMUST00000168645 Phc3-001 protein_coding Mus_musculus 0 2543
ENSMUST00000177992 Phc3-203 protein_coding Mus_musculus 0 2390
ENSMUST00000108255 Phc3-002 protein_coding Mus_musculus 0 2390
ENSMUST00000099163 Phc3-003 protein_coding Mus_musculus 0 1844
ENSMUST00000046624 Phc3-004 nonsense_mediated_decay Mus_musculus 0 1607
ENSMUST00000064718 Phc3-201 protein_coding Mus_musculus 0 1384
ENSMUST00000152357 Phc3-005 nonsense_mediated_decay Mus_musculus 0 1166
ENSMUST00000150939 Phc3-007 retained_intron Mus_musculus 0 375

Loading