C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choroideremia (Rab escort protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467744 CHM-004 ENSG00000188419 9606 - X:85861181-86047305 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000467744
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000467744 1.100±0.00 3.385±0.00 0.678±0.00 0.576±0.00 2.573±0.00 1.030±0.00 0.972±0.00 1.996±0.00 0.589±0.10 0.540±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KH CIL_0003KH_0001 CGP X:85277396-86047562
CIL_0003LE CIL_0003LE_0001 CGP X:85861180-86832604

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133469 Chm-004 processed_transcript Mus_musculus 4e-20 104
ENSMUST00000135821 Chm-003 processed_transcript Mus_musculus 4e-20 104
ENSMUST00000113388 Chm-002 protein_coding Mus_musculus 4e-20 104
ENSMUST00000026607 Chm-001 protein_coding Mus_musculus 4e-20 104

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