C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124429-ENSG00000188419 CGP 9606 X:85277396-86047562
GeneTranscriptPositionBiotype
ENSG00000124429 (POF1B)
premature ovarian failure, 1B 		ENST00000262753 (POF1B-001) 85277396-85379743 protein_coding
ENST00000373145 (POF1B-002) 85282115-85379717 protein_coding
ENSG00000188419 (CHM)
choroideremia (Rab escort protein 1) 		ENST00000357749 (CHM-001) 85861180-86047562 protein_coding
ENST00000467744 (CHM-004) 85861181-86047305 processed_transcript
ENST00000483950 (CHM-003) 86026958-86047561 processed_transcript
ENST00000487515 (CHM-005) 85978656-85981809 processed_transcript
ENST00000615443 (CHM-002) 85969087-86047539 protein_coding
ENSG00000199051 (MIR361)
microRNA 361 		ENST00000362181 (MIR361-201) 85903611-85903722 miRNA
ENSG00000223707 (RP1-93L7.3)
 ENST00000421841 (RP1-93L7.3-001) 85849410-85850139 processed_pseudogene
CIL_0003KH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034607-ENSMUSG00000025531 CGP 10090 X:112638431-113185517
GeneTranscriptPositionBiotype
ENSMUSG00000025531 (Chm)
choroidermia 		ENSMUST00000026607 (Chm-001) 113040593-113185517 protein_coding
ENSMUST00000113388 (Chm-002) 113040595-113185517 protein_coding
ENSMUST00000133469 (Chm-004) 113116289-113185509 processed_transcript
ENSMUST00000135821 (Chm-003) 113062531-113185509 processed_transcript
ENSMUST00000153417 (Chm-005) 113043174-113047579 processed_transcript
ENSMUSG00000034607 (Pof1b)
premature ovarian failure 1B 		ENSMUST00000039887 (Pof1b-001) 112638431-112698651 protein_coding
ENSMUSG00000081399 (Gm14921)
predicted gene 14921 		ENSMUST00000118643 (Gm14921-001) 112660521-112661428 processed_pseudogene
ENSMUSG00000083560 (Gm14939)
predicted gene 14939 		ENSMUST00000120347 (Gm14939-001) 113034193-113035654 processed_pseudogene
ENSMUSG00000084963 (Gm14936)
predicted gene 14936 		ENSMUST00000137765 (Gm14936-001) 112980864-113009754 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KH_0001ENSG00000124429ENST00000262753ENST00000373145ENSG00000188419ENST00000357749ENST00000467744ENST00000483950ENST00000487515ENST00000615443ENSG00000199051ENST00000362181ENSG00000223707ENST00000421841CIL_0003KH_0002ENSMUSG00000025531ENSMUST00000026607ENSMUST00000113388ENSMUST00000133469ENSMUST00000135821ENSMUST00000153417ENSMUSG00000034607ENSMUST00000039887ENSMUSG00000081399ENSMUST00000118643ENSMUSG00000083560ENSMUST00000120347ENSMUSG00000084963ENSMUST00000137765
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KH_0001ENSG00000124429ENST00000262753ENST00000373145ENSG00000188419ENST00000357749ENST00000467744ENST00000615443ENSG00000199051ENST00000362181ENSG00000223707ENST00000421841CIL_0003KH_0002ENSMUSG00000025531ENSMUST00000026607ENSMUST00000113388ENSMUST00000135821ENSMUST00000153417ENSMUSG00000034607ENSMUST00000039887ENSMUSG00000081399ENSMUST00000118643ENSMUSG00000083560ENSMUST00000120347ENSMUSG00000084963ENSMUST00000137765
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124429 ENST00000262753 0.319±0.00 0.583±0.00 N/A 0.023±0.00 2.496±2.41 4.018±0.73 0.493±0.17 0.480±0.38 0.117±0.00 0.533±0.00 N/A 7.634±8.33 0.757±0.38 0.082±0.06
ENST00000373145 N/A N/A 0.418±0.00 0.014±0.00 11.416±0.00 18.216±0.00 N/A 0.067±0.00 2.649±0.00 N/A 0.172±0.00 16.560±0.00 N/A 0.016±0.00
ENSG00000188419 ENST00000357749 1.961±0.00 1.566±0.00 2.437±0.00 4.038±0.06 2.999±1.16 1.966±0.56 1.202±0.83 1.977±0.95 1.352±0.69 1.136±0.27 1.623±0.00 1.539±0.30 1.251±0.01 1.632±0.00
ENST00000467744 N/A 1.100±0.00 3.385±0.00 N/A 0.678±0.00 0.576±0.00 N/A 2.573±0.00 1.030±0.00 0.972±0.00 N/A 1.996±0.00 0.589±0.10 0.540±0.00
ENST00000483950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.574±0.18
ENSG00000199051 ENST00000362181 N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223707 ENST00000421841 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025531 ENSMUST00000026607 0.477±0.14 1.316±0.00 1.780±0.52 2.311±1.08 0.613±0.33 0.884±0.06 0.917±0.35 1.004±0.43 0.980±0.38 1.765±0.07 3.128±0.36 3.095±1.79 2.816±0.88 0.080±0.02
ENSMUST00000113388 0.434±0.28 0.959±0.46 N/A N/A 0.649±0.16 1.379±0.50 0.165±0.00 0.801±0.06 0.816±0.11 2.252±0.00 0.614±0.00 0.580±0.30 N/A 0.180±0.09
ENSMUST00000133469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135821 0.350±0.03 1.116±0.52 N/A 0.356±0.00 0.259±0.08 N/A N/A 0.185±0.00 0.207±0.08 0.405±0.09 N/A 0.401±0.12 N/A 0.080±0.01
ENSMUST00000153417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A
ENSMUSG00000034607 ENSMUST00000039887 0.305±0.03 N/A 2.957±0.80 0.077±0.00 0.890±0.08 8.638±1.21 0.100±0.03 0.080±0.03 0.019±0.01 3.077±0.83 0.052±0.04 0.195±0.10 0.014±0.01 N/A
ENSMUSG00000081399 ENSMUST00000118643 N/A N/A 0.091±0.02 N/A 0.189±0.10 1.110±0.26 N/A 0.058±0.02 N/A 0.250±0.05 N/A N/A N/A N/A
ENSMUSG00000083560 ENSMUST00000120347 N/A N/A N/A 0.027±0.01 N/A N/A N/A N/A 0.024±0.01 N/A N/A N/A 0.122±0.10 N/A
ENSMUSG00000084963 ENSMUST00000137765 N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A

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