C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptoporin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468110 SYNPR-003 ENSG00000163630 9606 + 3:63278328-63615920 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartPlacentaENST00000468110
Transcript ID Heart Placenta
ENST00000468110 0.074±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078O CIL_00078O_0001 CGP 3:63228315-63679020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112656 Synpr-002 protein_coding Mus_musculus 0 905
ENSMUST00000070323 Synpr-001 protein_coding Mus_musculus 0 905

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