C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468715 RPL7P9-001 ENSG00000137970 9606 - 1:96678874-96679620 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000468715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000468715 0.087±0.00 0.128±0.00 1.095±0.00 1.589±1.53 2.058±1.97 4.124±3.89 2.205±2.19 3.284±3.27 12.050±0.00 2.842±2.72 7.136±0.00 9.215±14.29 0.119±0.09 0.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J2 CIL_0007J2_0001 UCNEbase 1:95311769-97837577

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 887
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 848
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000118553 Gm8534-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 632
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 632
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 569
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 272
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 272

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