C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468834 RP11-462L8.2-001 ENSG00000235962 9606 - 10:33057615-33058407 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000468834
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000468834 0.115±0.00 0.221±0.00 0.055±0.00 0.078±0.00 0.024±0.00 0.137±0.00 0.153±0.00 0.022±0.00 0.050±0.00 0.194±0.00 0.089±0.00 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FV CIL_0006FV_0002 CGP 10:32900319-33336262

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 773
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 599
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000117903 Gm8097-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 3e-32 143
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 0.000001 58

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