C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14156
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121538 Gm14156-001 ENSMUSG00000082689 10090 + 2:152467394-152467876 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverOvaryPlacentaTestisENSMUST00000121538
Transcript ID Adipose Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000121538 0.308±0.00 0.007±0.00 0.112±0.00 0.092±0.06 0.288±0.13 0.142±0.00 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 1e-39 167
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 560
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 372
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 401
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 556
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 394
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 560
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 556
ENST00000468834 RP11-462L8.2-001 processed_pseudogene Homo_sapiens 0 488
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 233
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 553
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 431
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 536
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 329
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 2e-18 97
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 518
ENST00000489392 RPL7A-007 processed_transcript Homo_sapiens 0 444
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 333
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 555
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 555

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