C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paroxysmal nonkinesigenic dyskinesia
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469689 PNKD-004 ENSG00000127838 9606 + 2:218270520-218272911 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverENST00000469689
Transcript ID Colon Heart Liver
ENST00000469689 0.641±0.00 0.367±0.00 0.931±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VJ CIL_0005VJ_0001 CGP 2:218264123-218346793
CIL_0005VI CIL_0005VI_0001 CGP 2:218270392-218346793

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152492 Pnkd-006 retained_intron Mus_musculus 0 457
ENSMUST00000113805 Pnkd-003 protein_coding Mus_musculus 0 448
ENSMUST00000087226 Pnkd-002 protein_coding Mus_musculus 0 372
ENSMUST00000138620 Pnkd-007 retained_intron Mus_musculus 0 200
ENSMUST00000129219 Pnkd-005 retained_intron Mus_musculus 0 200
ENSMUST00000027370 Pnkd-001 protein_coding Mus_musculus 0 200

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