C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470083 LSM2-004 ENSG00000204392 9606 - 6:31797396-31806817 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000470083
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000470083 11.966±0.00 1.599±0.00 2.648±0.84 3.899±0.00 7.752±0.00 2.864±0.00 5.850±1.17 4.477±0.00 12.691±0.00 12.239±1.96 6.594±0.00 9.067±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174241 Lsm2-009 processed_transcript Mus_musculus 0 372
ENSMUST00000172666 Lsm2-010 retained_intron Mus_musculus 0 348
ENSMUST00000173004 Lsm2-011 protein_coding Mus_musculus 0 348
ENSMUST00000172890 Lsm2-007 processed_transcript Mus_musculus 0 348
ENSMUST00000007266 Lsm2-003 protein_coding Mus_musculus 0 348
ENSMUST00000114011 Lsm2-001 protein_coding Mus_musculus 0 348
ENSMUST00000172777 Lsm2-004 processed_transcript Mus_musculus 0 339
ENSMUST00000174326 Lsm2-008 processed_transcript Mus_musculus 0 339
ENSMUST00000174434 Lsm2-006 retained_intron Mus_musculus 0 246
ENSMUST00000174860 Lsm2-005 retained_intron Mus_musculus 0 246

Loading