C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vesicle-associated membrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470357 VAMP3-002 ENSG00000049245 9606 + 1:7772707-7779806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverMuscleENST00000470357
Transcript ID Kidney Liver Muscle
ENST00000470357 2.736±0.00 2.569±0.00 1.562±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019N CIL_00019N_0002 CGP 1:6785324-7781432
CIL_0007VW CIL_0007VW_0001 VISTA 1:7770379-8371827
CIL_00019M CIL_00019M_0002 CGP 1:7771269-7845177

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030797 Vamp3-001 protein_coding Mus_musculus 0 387
ENSMUST00000155446 Vamp3-002 retained_intron Mus_musculus 0 259
ENSMUST00000125205 Vamp3-003 retained_intron Mus_musculus 6e-20 102

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