C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007824-ENSDARG00000070161 CGP 7955 11:41011852-41430774
GeneTranscriptPositionBiotype
ENSDARG00000007824 (CR847998.1)
Uncharacterized protein 		ENSDART00000046663 (CR847998.1-201) 41011852-41403023 protein_coding
ENSDARG00000070161 (vamp3)
vesicle-associated membrane protein 3 (cellubrevin) 		ENSDART00000102734 (vamp3-201) 41405002-41430774 protein_coding
ENSDART00000134082 (vamp3-002) 41405058-41429792 processed_transcript
ENSDART00000137516 (vamp3-001) 41405002-41430774 protein_coding
CIL_00019N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171735-ENSG00000049245 CGP 9606 1:6785324-7781432
GeneTranscriptPositionBiotype
ENSG00000049245 (VAMP3)
vesicle-associated membrane protein 3 		ENST00000054666 (VAMP3-001) 7771269-7781432 protein_coding
ENST00000470357 (VAMP3-002) 7772707-7779806 protein_coding
ENST00000487194 (VAMP3-003) 7777097-7778169 retained_intron
ENSG00000171735 (CAMTA1)
calmodulin binding transcription activator 1 		ENST00000303635 (CAMTA1-001) 6785324-7769706 protein_coding
ENST00000461311 (CAMTA1-005) 6785552-6887787 nonsense_mediated_decay
ENST00000461580 (CAMTA1-007) 6853052-6888150 processed_transcript
ENST00000467267 (CAMTA1-011) 6874056-6887842 processed_transcript
ENST00000467404 (CAMTA1-003) 6785518-6872019 protein_coding
ENST00000470648 (CAMTA1-006) 6853048-6888193 processed_transcript
ENST00000472283 (CAMTA1-008) 6853095-6872045 processed_transcript
ENST00000473578 (CAMTA1-010) 6785480-6872038 protein_coding
ENST00000476163 (CAMTA1-002) 6785464-6888201 processed_transcript
ENST00000476864 (CAMTA1-015) 7744961-7766522 protein_coding
ENST00000482934 (CAMTA1-012) 6825110-6888188 nonsense_mediated_decay
ENST00000486138 (CAMTA1-004) 6806988-6871858 nonsense_mediated_decay
ENST00000490738 (CAMTA1-009) 6785454-6872053 processed_transcript
ENST00000490905 (CAMTA1-013) 7744914-7767856 protein_coding
ENST00000495233 (CAMTA1-014) 7736408-7767856 protein_coding
ENST00000557126 (CAMTA1-016) 6785491-6887865 protein_coding
ENSG00000225126 (RP4-549F15.1)
 ENST00000440032 (RP4-549F15.1-001) 7441096-7441554 antisense
ENSG00000227950 (RP11-312B8.2)
 ENST00000433407 (RP11-312B8.2-001) 6834333-6834618 processed_pseudogene
ENSG00000237365 (RP11-334N17.1)
 ENST00000456701 (RP11-334N17.1-001) 7008376-7014279 antisense
ENSG00000237402 (CAMTA1-IT1)
CAMTA1 intronic transcript 1 (non-protein coding) 		ENST00000427317 (CAMTA1-IT1-001) 7368942-7370270 sense_intronic
ENSG00000237728 (RP3-453P22.2)
 ENST00000411708 (RP3-453P22.2-002) 7388183-7389419 antisense
ENST00000618051 (RP3-453P22.2-001) 7382487-7389754 antisense
ENSG00000269925 (RP3-467L1.6)
 ENST00000602406 (RP3-467L1.6-001) 7776383-7776775 sense_intronic
ENSG00000269978 (RP11-338N10.3)
 ENST00000602916 (RP11-338N10.3-001) 7700704-7700970 lincRNA
ENSG00000270035 (RP11-338N10.2)
 ENST00000602973 (RP11-338N10.2-001) 7698303-7698872 lincRNA
ENSG00000270171 (RP11-338N10.1)
 ENST00000602640 (RP11-338N10.1-001) 7693124-7694844 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019N_0001ENSDARG00000007824ENSDART00000046663ENSDARG00000070161ENSDART00000102734ENSDART00000134082ENSDART00000137516CIL_00019N_0002ENSG00000049245ENST00000054666ENST00000470357ENST00000487194ENSG00000171735ENST00000303635ENST00000461311ENST00000461580ENST00000467267ENST00000467404ENST00000470648ENST00000472283ENST00000473578ENST00000476163ENST00000476864ENST00000482934ENST00000486138ENST00000490738ENST00000490905ENST00000495233ENST00000557126ENSG00000225126ENST00000440032ENSG00000227950ENST00000433407ENSG00000237365ENST00000456701ENSG00000237402ENST00000427317ENSG00000237728ENST00000411708ENST00000618051ENSG00000269925ENST00000602406ENSG00000269978ENST00000602916ENSG00000270035ENST00000602973ENSG00000270171ENST00000602640
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019N_0001ENSDARG00000007824ENSDART00000046663ENSDARG00000070161ENSDART00000102734ENSDART00000134082ENSDART00000137516CIL_00019N_0002ENSG00000049245ENST00000054666ENST00000470357ENST00000487194ENSG00000171735ENST00000303635ENST00000461311ENST00000467267ENST00000470648ENST00000473578ENST00000476163ENST00000490738ENST00000490905ENST00000495233ENSG00000225126ENST00000440032ENSG00000227950ENST00000433407ENSG00000237365ENST00000456701ENSG00000237402ENST00000427317ENSG00000237728ENST00000411708ENST00000618051ENSG00000269925ENST00000602406ENSG00000269978ENST00000602916ENSG00000270035ENST00000602973ENSG00000270171ENST00000602640
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007824 ENSDART00000046663 N/A N/A N/A 27.289±1.86 N/A N/A 0.107±0.02 0.138±0.03 0.152±0.00 N/A 1.036±0.00 N/A N/A N/A
ENSDARG00000070161 ENSDART00000102734 N/A N/A N/A 7.511±2.25 N/A N/A 38.404±11.54 14.288±6.39 1.053±0.00 N/A 21.510±0.00 N/A N/A N/A
ENSDART00000134082 N/A N/A N/A N/A N/A N/A 16.773±0.00 N/A 2.405±0.00 N/A N/A N/A N/A N/A
ENSDART00000137516 N/A N/A N/A 19.402±10.91 N/A N/A 52.635±13.35 32.023±7.93 0.996±0.00 N/A 8.480±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000049245 ENST00000054666 50.897±0.00 32.140±0.00 5.790±0.00 27.290±18.13 30.160±19.89 19.017±6.08 13.105±9.50 19.338±10.38 9.093±0.71 26.542±8.96 12.169±8.92 34.082±11.15 48.170±4.70 27.286±1.81
ENST00000470357 N/A N/A N/A N/A N/A N/A N/A 2.736±0.00 2.569±0.00 N/A 1.562±0.00 N/A N/A N/A
ENST00000487194 N/A N/A N/A 46.200±0.00 N/A N/A N/A N/A 20.976±0.00 N/A 14.819±0.00 N/A N/A N/A
ENSG00000171735 ENST00000303635 N/A N/A 0.175±0.00 8.383±0.00 0.412±0.00 0.613±0.54 0.090±0.00 0.695±0.55 0.153±0.00 2.157±0.00 0.156±0.00 0.391±0.05 0.295±0.03 1.395±0.08
ENST00000461311 22.460±0.00 12.704±0.00 N/A N/A 10.534±0.00 38.408±0.00 29.682±0.00 10.094±6.29 13.190±0.00 36.372±0.00 20.962±0.00 25.040±13.88 10.790±0.15 25.594±0.00
ENST00000461580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467267 N/A N/A N/A N/A N/A 1.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470648 N/A N/A 1.535±0.00 N/A N/A 1.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473578 23.172±0.00 16.630±0.00 1.699±0.00 N/A 21.257±0.00 15.486±14.03 19.575±14.19 23.750±0.00 7.203±1.90 19.549±0.00 9.973±7.09 31.340±30.66 10.065±3.85 32.083±0.00
ENST00000476163 N/A 12.401±0.00 N/A N/A 7.626±0.00 10.281±0.00 N/A 11.235±0.00 5.330±0.00 N/A 5.823±0.00 6.662±2.79 5.121±2.38 12.088±0.00
ENST00000476864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490738 11.043±0.00 N/A 2.610±0.00 N/A N/A N/A 1.807±0.00 N/A N/A N/A N/A 5.439±0.00 N/A N/A
ENST00000490905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00 0.773±0.00 1.990±0.00
ENST00000495233 N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A 2.426±0.00
ENST00000557126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225126 ENST00000440032 N/A N/A N/A N/A 0.041±0.00 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A 0.254±0.22
ENSG00000227950 ENST00000433407 N/A 0.140±0.00 0.355±0.00 N/A N/A N/A N/A N/A 1.015±0.00 0.187±0.02 0.736±0.00 1.529±1.39 N/A N/A
ENSG00000237365 ENST00000456701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00
ENSG00000237402 ENST00000427317 0.386±0.00 N/A N/A 0.337±0.01 0.429±0.00 N/A 0.052±0.00 0.058±0.00 0.298±0.00 0.104±0.00 N/A 0.112±0.00 N/A 0.538±0.32
ENSG00000237728 ENST00000411708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.257±0.00
ENST00000618051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00
ENSG00000269925 ENST00000602406 0.174±0.00 0.629±0.00 1.291±0.00 2.097±1.44 2.077±1.56 2.169±0.82 0.569±0.34 1.016±0.00 0.501±0.48 3.225±2.56 N/A 1.672±0.72 0.235±0.11 0.726±0.02
ENSG00000269978 ENST00000602916 0.094±0.00 N/A N/A 0.378±0.00 N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.780±0.85 N/A 0.151±0.07
ENSG00000270035 ENST00000602973 N/A 0.145±0.00 N/A 0.378±0.00 0.313±0.00 N/A 0.152±0.08 0.186±0.00 0.099±0.00 0.036±0.00 N/A 0.171±0.08 N/A 0.084±0.00
ENSG00000270171 ENST00000602640 0.015±0.00 0.078±0.00 N/A 0.416±0.10 0.087±0.00 0.101±0.00 0.057±0.01 0.078±0.00 0.021±0.00 0.136±0.10 N/A 0.079±0.02 N/A 0.174±0.01

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