C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470400 U2SURP-009 ENSG00000163714 9606 + 3:143001627-143021585 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000470400
Transcript ID Muscle
ENST00000470400 2.747±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191213 U2surp-009 nonsense_mediated_decay Mus_musculus 0 1230
ENSMUST00000079659 U2surp-002 protein_coding Mus_musculus 0 1230
ENSMUST00000078374 U2surp-001 protein_coding Mus_musculus 0 878
ENSMUST00000185515 U2surp-005 protein_coding Mus_musculus 0 680
ENSMUST00000190019 U2surp-006 protein_coding Mus_musculus 0 254
ENSMUST00000186076 U2surp-004 retained_intron Mus_musculus 7e-34 148
ENSMUST00000188017 U2surp-008 retained_intron Mus_musculus 0.00000000000007 82

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