C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191213 U2surp-009 ENSMUSG00000032407 10090 - 9:95461354-95511995 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000191213
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000191213 1.002±0.25 0.341±0.10 11.152±0.00 0.526±0.06 0.493±0.12 1.250±0.00 1.776±0.97 0.631±0.00 1.144±0.36 4.872±7.13 10.265±8.11 4.076±5.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000461591 U2SURP-003 retained_intron Homo_sapiens 0 1844
ENST00000461844 U2SURP-018 retained_intron Homo_sapiens 0 329
ENST00000463563 U2SURP-004 nonsense_mediated_decay Homo_sapiens 0 2582
ENST00000465175 U2SURP-007 protein_coding Homo_sapiens 0 640
ENST00000467348 U2SURP-019 protein_coding Homo_sapiens 0 929
ENST00000470400 U2SURP-009 retained_intron Homo_sapiens 0 1230
ENST00000472373 U2SURP-014 retained_intron Homo_sapiens 0 926
ENST00000473835 U2SURP-001 protein_coding Homo_sapiens 0 2582
ENST00000480029 U2SURP-005 protein_coding Homo_sapiens 0 2126
ENST00000485374 U2SURP-010 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000488497 U2SURP-002 nonsense_mediated_decay Homo_sapiens 0 4470
ENST00000488587 U2SURP-012 retained_intron Homo_sapiens 0 1273
ENST00000491827 U2SURP-011 retained_intron Homo_sapiens 0 634
ENST00000493598 U2SURP-022 protein_coding Homo_sapiens 0 2571
ENST00000493782 U2SURP-006 protein_coding Homo_sapiens 0 791
ENST00000495088 RP11-624D20.1-001 processed_pseudogene Homo_sapiens 0 861
ENST00000496100 U2SURP-017 retained_intron Homo_sapiens 0 292
ENST00000600150 U2SURP-008 protein_coding Homo_sapiens 0 490

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