C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470416 PPP2R2D-007 ENSG00000175470 9606 + 10:131901291-131959827 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverENST00000470416
Transcript ID Adipose Adrenal Brain Breast Heart Liver
ENST00000470416 0.413±0.00 0.765±0.00 0.800±0.00 0.364±0.00 0.563±0.00 0.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 1687
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 1687
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 968
ENSMUST00000136824 Ppp2r2d-007 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 544
ENSDART00000028983 PPP2R2A (2 of 2)-201 protein_coding Danio_rerio 0 536
ENSDART00000155816 PPP2R2A (2 of 2)-001 protein_coding Danio_rerio 0 536
ENSMUST00000152104 Ppp2r2d-005 processed_transcript Mus_musculus 0 327
ENSMUST00000140047 Ppp2r2d-006 processed_transcript Mus_musculus 0 292
ENSMUST00000148453 Ppp2r2d-004 nonsense_mediated_decay Mus_musculus 0 265
ENSMUST00000128157 Ppp2r2d-002 retained_intron Mus_musculus 0 239

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