C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470927 RPL7P17-001 ENSG00000214062 9606 - 4:77082403-77083126 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyOvaryTestisENST00000470927
Transcript ID Adipose Adrenal Breast Heart Kidney Ovary Testis
ENST00000470927 0.019±0.00 0.159±0.00 0.020±0.00 0.069±0.00 0.141±0.00 0.167±0.15 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0001 VISTA 4:76511627-77112790
CIL_0008OK CIL_0008OK_0001 VISTA 4:76686015-77293072

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 584
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 531
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 531
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 529

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