C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078286 Rpl7l1-201 ENSMUSG00000063888 10090 - 17:46773907-46782656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078286 19.516±3.62 7.731±2.58 21.848±1.89 15.532±6.87 8.768±2.89 12.413±1.27 10.851±0.40 20.941±0.85 25.079±8.69 11.401±3.83 9.083±0.89 16.891±3.71 24.912±6.46 7.165±2.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005840 IEA ribosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304734 RPL7L1-001 protein_coding Homo_sapiens 0 763
ENST00000397415 RPL7L1-002 processed_transcript Homo_sapiens 0 593
ENST00000405921 RP1-290I10.2-001 processed_pseudogene Homo_sapiens 0 442
ENST00000417594 RPL7L1P12-001 processed_pseudogene Homo_sapiens 0 527
ENST00000423238 RPL7P57-001 processed_pseudogene Homo_sapiens 0 619
ENST00000425129 RPL7P46-001 processed_pseudogene Homo_sapiens 0 658
ENST00000431298 RPL7L1P9-001 processed_pseudogene Homo_sapiens 0 569
ENST00000437739 RPL7P28-001 processed_pseudogene Homo_sapiens 0 582
ENST00000446092 RPL7L1P11-001 processed_pseudogene Homo_sapiens 0 584
ENST00000448259 RPL7L1P1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000449851 RPL7P14-001 processed_pseudogene Homo_sapiens 0 582
ENST00000455249 RPL7L1P3-001 processed_pseudogene Homo_sapiens 0 244
ENST00000462348 RPL7L1-008 processed_transcript Homo_sapiens 0 351
ENST00000466005 RPL7P22-001 processed_pseudogene Homo_sapiens 0 634
ENST00000469911 RPL7L1P8-001 processed_pseudogene Homo_sapiens 0 560
ENST00000470927 RPL7P17-001 processed_pseudogene Homo_sapiens 0 584
ENST00000478287 RPL7P21-001 processed_pseudogene Homo_sapiens 0 553
ENST00000483998 RPL7L1-005 processed_transcript Homo_sapiens 0 593
ENST00000492836 RPL7L1-007 processed_transcript Homo_sapiens 2e-37 159
ENST00000493763 RPL7L1-003 protein_coding Homo_sapiens 0 763
ENST00000497417 RPL7L1-004 retained_intron Homo_sapiens 3.00004e-41 174
ENST00000509986 RPL7L1P7-001 processed_pseudogene Homo_sapiens 0 420
ENST00000511702 RPL7L1P13-001 processed_pseudogene Homo_sapiens 0 536
ENST00000511857 RP11-15B17.2-001 processed_pseudogene Homo_sapiens 0 638
ENST00000513004 RPL7L1P4-001 processed_pseudogene Homo_sapiens 0 451
ENST00000520784 RP11-550I15.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000530523 RP11-412B14.2-001 processed_pseudogene Homo_sapiens 0 444
ENST00000560719 RP11-621H8.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000569728 AC002310.10-001 unprocessed_pseudogene Homo_sapiens 0 508
ENST00000572039 RP11-433P17.1-001 processed_pseudogene Homo_sapiens 0 571
ENST00000590816 RPL7L1P5-001 processed_pseudogene Homo_sapiens 0 573
ENST00000602561 RPL7L1-010 protein_coding Homo_sapiens 0 534

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