C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471472 RPL7P5-001 ENSG00000241562 9606 - 15:99551382-99552117 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverENST00000471472
Transcript ID Adrenal Brain Breast Colon Liver
ENST00000471472 0.016±0.00 0.065±0.00 0.016±0.00 0.015±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Q CIL_00079Q_0002 CGP 15:99251362-99716466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 577
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 549
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 412
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 412
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 390
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 357
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 204
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 204

Loading