C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 6B, cGMP-specific, rod, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471824 PDE6B-011 ENSG00000133256 9606 + 4:663770-670193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartLungOvaryPlacentaENST00000471824
Transcript ID Adrenal Bladder Colon Heart Lung Ovary Placenta
ENST00000471824 3.178±0.00 0.244±0.00 0.715±0.00 0.087±0.00 0.961±0.00 1.078±0.00 1.353±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070Z CIL_00070Z_0002 CGP 4:625584-674338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025956 Pde6c-201 protein_coding Mus_musculus 6e-38 161
ENSMUST00000112329 Pde6c-202 protein_coding Mus_musculus 5e-19 99

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