C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00070Z_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000011671-ENSDARG00000078113 | CGP | 7955 | 21:19184333-19209356  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000011671  (pde6b)phosphodiesterase 6B, cGMP-specific, rod, beta |
ENSDART00000135816 (pde6b-001)
|
19184333-19204482 | protein_coding | |
|
ENSDARG00000078113 (atp5ia) ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e, duplicate a |
ENSDART00000115236 (atp5ia-001)
|
19205627-19209356 | protein_coding | |
| CIL_00070Z_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000133256-ENSG00000169020 | CGP | 9606 | 4:625584-674338 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000133256 (PDE6B) phosphodiesterase 6B, cGMP-specific, rod, beta |
ENST00000255622 (PDE6B-001)
|
625584-670782 | protein_coding | |
|
ENST00000429163 (PDE6B-003)
|
653180-670233 | protein_coding | ||
|
ENST00000460119 (PDE6B-010)
|
663723-664922 | retained_intron | ||
|
ENST00000461490 (PDE6B-012)
|
664910-670314 | protein_coding | ||
|
ENST00000465426 (PDE6B-007)
|
651559-654858 | protein_coding | ||
|
ENST00000467152 (PDE6B-004)
|
653211-654374 | retained_intron | ||
|
ENST00000471824 (PDE6B-011)
|
663770-670193 | protein_coding | ||
|
ENST00000474251 (PDE6B-005)
|
651985-654288 | retained_intron | ||
|
ENST00000476034 (PDE6B-009)
|
652273-654669 | retained_intron | ||
|
ENST00000487902 (PDE6B-006)
|
651985-656943 | protein_coding | ||
|
ENST00000488061 (PDE6B-008)
|
653177-654084 | protein_coding | ||
|
ENST00000496514 (PDE6B-002)
|
625606-670753 | protein_coding | ||
|
ENSG00000169020 (ATP5I) ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E |
ENST00000304312 (ATP5I-001)
|
672436-674338 | protein_coding | |
|
ENST00000505852 (ATP5I-002)
|
672438-674330 | processed_transcript | ||
|
ENST00000506525 (ATP5I-003)
|
672438-673821 | processed_transcript | ||
|
ENST00000515116 (ATP5I-005)
|
672494-673523 | retained_intron | ||
|
ENST00000515202 (ATP5I-004)
|
672436-674121 | retained_intron | ||
|
ENSG00000215375 (MYL5) myosin, light chain 5, regulatory |
ENST00000400159 (MYL5-001)
|
677922-682033 | protein_coding | |
|
ENST00000502720 (MYL5-005)
|
674542-676481 | retained_intron | ||
|
ENST00000503300 (MYL5-003)
|
674503-682027 | nonsense_mediated_decay | ||
|
ENST00000503612 (MYL5-006)
|
680746-682028 | retained_intron | ||
|
ENST00000505477 (MYL5-009)
|
673941-682022 | protein_coding | ||
|
ENST00000506838 (MYL5-002)
|
673580-682027 | protein_coding | ||
|
ENST00000507804 (MYL5-008)
|
678189-680579 | protein_coding | ||
|
ENST00000511290 (MYL5-004)
|
674560-682028 | protein_coding | ||
|
ENST00000513662 (MYL5-007)
|
677954-681990 | nonsense_mediated_decay | ||
|
ENSG00000272927 (RP11-1191J2.5) |
ENST00000609172 (RP11-1191J2.5-001)
|
661209-661945 | antisense | |
| CIL_00070Z_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029491-ENSMUSG00000050856 | CGP | 10090 | 5:108388391-108434448 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029491 (Pde6b) phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide |
ENSMUST00000031456 (Pde6b-001)
|
108388391-108431743 | protein_coding | |
|
ENSMUST00000130448 (Pde6b-003)
|
108430377-108432397 | retained_intron | ||
|
ENSMUST00000134865 (Pde6b-002)
|
108388426-108431667 | retained_intron | ||
|
ENSMUSG00000050856 (Atp5k) ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E |
ENSMUST00000049628 (Atp5k-001)
|
108433244-108434448 | protein_coding | |
|
ENSMUST00000118632 (Atp5k-002)
|
108433244-108434448 | protein_coding | ||
|
ENSMUST00000123184 (Atp5k-003)
|
108433246-108434397 | retained_intron | ||
Expression Patterns
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