C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472088 RP11-941H19.2-001 ENSG00000213791 9606 + 8:80300869-80301481 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000472088
Transcript ID Adipose Adrenal Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000472088 0.148±0.00 0.122±0.00 0.080±0.00 0.037±0.00 0.087±0.00 0.085±0.00 0.141±0.00 0.059±0.00 0.260±0.00 0.210±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NG CIL_0001NG_0001 CGP 8:80034868-80526265

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004554 Rps5-001 protein_coding Mus_musculus 0 619
ENSMUST00000108539 Rps5-002 protein_coding Mus_musculus 0 619
ENSMUST00000137329 Rps5-004 protein_coding Mus_musculus 0 542
ENSMUST00000147435 Rps5-003 protein_coding Mus_musculus 0 542
ENSMUST00000139349 Rps5-006 retained_intron Mus_musculus 0 427

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