C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139349 Rps5-006 ENSMUSG00000012848 10090 + 7:12922331-12926220 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000007 CIL_000007_0002 CGP 7:12922290-12931072

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000196551 RPS5-201 protein_coding Homo_sapiens 0 638
ENST00000402406 RP11-307I14.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000414617 RPS5P3-001 processed_pseudogene Homo_sapiens 0 459
ENST00000415238 RPS5P2-001 processed_pseudogene Homo_sapiens 0 331
ENST00000430252 DSE-005 protein_coding Homo_sapiens 0 351
ENST00000435100 RP3-486I3.4-001 processed_pseudogene Homo_sapiens 0 534
ENST00000472088 RP11-941H19.2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000570744 RPS5P3-001 processed_pseudogene Homo_sapiens 0 459
ENST00000596046 RPS5-002 protein_coding Homo_sapiens 0 592
ENST00000596314 RPS5-004 protein_coding Homo_sapiens 0 590
ENST00000598098 RPS5-005 protein_coding Homo_sapiens 1.99993e-41 172
ENST00000598495 RPS5-006 protein_coding Homo_sapiens 0 453
ENST00000598807 RPS5-007 retained_intron Homo_sapiens 0 645
ENST00000599232 RPS5-003 retained_intron Homo_sapiens 5.00264e-43 180
ENST00000601521 RPS5-001 protein_coding Homo_sapiens 0 638

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