C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: all-trans retinoic acid-induced differentiation factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472515 ATRAID-005 ENSG00000138085 9606 + 2:27216374-27217157 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENST00000472515
Transcript ID Bladder Muscle
ENST00000472515 10.559±0.00 14.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EJ CIL_0000EJ_0001 CGP 2:27149004-27212958
CIL_0000EI CIL_0000EI_0001 CGP 2:27199587-27217178
CIL_0000EH CIL_0000EH_0001 CGP 2:27212027-27243943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133215 Atraid-007 processed_transcript Mus_musculus 0 281
ENSMUST00000114659 Atraid-005 protein_coding Mus_musculus 0 272
ENSMUST00000114660 Atraid-002 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000013766 Atraid-001 protein_coding Mus_musculus 0 272
ENSMUST00000138309 Atraid-004 retained_intron Mus_musculus 0 272
ENSMUST00000153643 Atraid-006 protein_coding Mus_musculus 6e-33 145

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