C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: all-trans retinoic acid induced differentiation factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153643 Atraid-006 ENSMUSG00000013622 10090 + 5:31048722-31054344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153643
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153643 30.120±0.00 52.506±0.00 70.536±43.43 12.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EJ CIL_0000EJ_0002 CGP 5:30968677-31048924
CIL_0000EI CIL_0000EI_0002 CGP 5:31036036-31054633
CIL_0000EH CIL_0000EH_0002 CGP 5:31048312-31078479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380171 ATRAID-001 protein_coding Homo_sapiens 0 475
ENST00000405489 ATRAID-002 protein_coding Homo_sapiens 0 438
ENST00000419744 ATRAID-003 protein_coding Homo_sapiens 0 261
ENST00000472515 ATRAID-005 retained_intron Homo_sapiens 6e-33 145
ENST00000484646 ATRAID-006 retained_intron Homo_sapiens 2e-27 126
ENST00000491220 ATRAID-004 retained_intron Homo_sapiens 2e-28 128
ENST00000606999 ATRAID-007 protein_coding Homo_sapiens 0 475
ENST00000611786 ATRAID-201 protein_coding Homo_sapiens 0 475

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