C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: all-trans retinoic acid induced differentiation factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138309 Atraid-004 ENSMUSG00000013622 10090 + 5:31048321-31054617 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryENSMUST00000138309
Transcript ID Brain Muscle Ovary
ENSMUST00000138309 7.791±2.46 2.962±0.00 8.213±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EJ CIL_0000EJ_0002 CGP 5:30968677-31048924
CIL_0000EI CIL_0000EI_0002 CGP 5:31036036-31054633
CIL_0000EH CIL_0000EH_0002 CGP 5:31048312-31078479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380171 ATRAID-001 protein_coding Homo_sapiens 0 340
ENST00000405489 ATRAID-002 protein_coding Homo_sapiens 0 340
ENST00000419744 ATRAID-003 protein_coding Homo_sapiens 2e-33 147
ENST00000472515 ATRAID-005 retained_intron Homo_sapiens 0 272
ENST00000484646 ATRAID-006 retained_intron Homo_sapiens 1e-34 150
ENST00000491220 ATRAID-004 retained_intron Homo_sapiens 2e-32 141
ENST00000606999 ATRAID-007 protein_coding Homo_sapiens 0 340
ENST00000611786 ATRAID-201 protein_coding Homo_sapiens 0 340

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