C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein interacting with PRKCA 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472724 PICK1-015 ENSG00000100151 9606 + 22:38065113-38072007 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000472724
Transcript ID Lung
ENST00000472724 1.864±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0008MM CIL_0008MM_0001 VISTA 22:37872841-38473542
CIL_0003QD CIL_0003QD_0001 CGP 22:37970686-38075701
CIL_0003QE CIL_0003QE_0001 CGP 22:38056311-38084093

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169548 Pick1-005 retained_intron Mus_musculus 0 433
ENSMUST00000166155 Pick1-012 protein_coding Mus_musculus 0 407
ENSMUST00000053926 Pick1-003 protein_coding Mus_musculus 0 407
ENSMUST00000018295 Pick1-001 protein_coding Mus_musculus 0 407
ENSMUST00000163571 Pick1-002 protein_coding Mus_musculus 0 407
ENSMUST00000165609 Pick1-004 retained_intron Mus_musculus 0 294
ENSMUST00000168513 Pick1-010 processed_transcript Mus_musculus 0 268
ENSMUST00000172162 Pick1-007 processed_transcript Mus_musculus 3e-30 135
ENSMUST00000113954 Pick1-011 processed_transcript Mus_musculus 2e-22 110

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