C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473280 SYTL1-008 ENSG00000142765 9606 + 1:27343228-27347458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaENST00000473280
Transcript ID Colon Liver Ovary Placenta
ENST00000473280 2.184±0.00 0.485±0.00 62.567±0.00 19.908±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0017137 IEA Rab GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142039 Sytl1-002 processed_transcript Mus_musculus 0 307
ENSMUST00000030674 Sytl1-001 protein_coding Mus_musculus 0 307
ENSMUST00000105908 Sytl1-004 protein_coding Mus_musculus 0 307
ENSMUST00000154911 Sytl1-003 processed_transcript Mus_musculus 0 267

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