C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142039 Sytl1-002 ENSMUSG00000028860 10090 - 4:133253098-133263087 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142039 0.163±0.00 0.525±0.25 5.127±0.96 0.099±0.00 3.076±0.36 7.027±1.31 0.079±0.03 0.524±0.24 0.110±0.08 0.724±0.00 0.085±0.00 0.940±0.32 0.149±0.07 0.072±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318074 SYTL1-001 protein_coding Homo_sapiens 0 728
ENST00000473280 SYTL1-008 protein_coding Homo_sapiens 0 307
ENST00000475199 SYTL1-005 retained_intron Homo_sapiens 0 436
ENST00000483926 SYTL1-003 retained_intron Homo_sapiens 0 728
ENST00000485269 SYTL1-007 retained_intron Homo_sapiens 2e-34 150
ENST00000490170 SYTL1-004 retained_intron Homo_sapiens 0 549
ENST00000496001 SYTL1-006 retained_intron Homo_sapiens 5e-30 135
ENST00000543823 SYTL1-010 protein_coding Homo_sapiens 0 728
ENST00000615284 SYTL1-011 retained_intron Homo_sapiens 0 549
ENST00000616558 SYTL1-009 protein_coding Homo_sapiens 0 728
ENST00000618673 SYTL1-012 protein_coding Homo_sapiens 0 553

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