C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475146 CPNE1-024 ENSG00000214078 9606 - 20:35658930-35664900 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FU CIL_0005FU_0001 CGP 20:35615892-35664956

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109608 Cpne1-001 protein_coding Mus_musculus 0 191
ENSMUST00000109604 Rbm12-002 protein_coding Mus_musculus 0 191
ENSMUST00000136296 Cpne1-005 protein_coding Mus_musculus 0 189
ENSMUST00000109607 Cpne1-002 protein_coding Mus_musculus 0 189
ENSMUST00000184265 Cpne1-015 protein_coding Mus_musculus 0 189
ENSMUST00000059647 Rbm12-001 protein_coding Mus_musculus 0 189
ENSMUST00000183518 Gm28036-003 protein_coding Mus_musculus 0 189
ENSMUST00000184899 Gm28036-004 nonsense_mediated_decay Mus_musculus 1.4013e-45 187
ENSMUST00000132494 Gm28036-001 nonsense_mediated_decay Mus_musculus 5e-39 165
ENSMUST00000142975 Cpne1-003 retained_intron Mus_musculus 1e-34 150
ENSMUST00000138068 Rbm12-006 protein_coding Mus_musculus 8e-27 124
ENSMUST00000133921 Cpne1-011 protein_coding Mus_musculus 1e-25 121
ENSMUST00000159952 Gm28036-008 nonsense_mediated_decay Mus_musculus 1e-25 121
ENSMUST00000160165 Gm28036-007 nonsense_mediated_decay Mus_musculus 1e-25 121
ENSMUST00000162612 Gm28036-006 nonsense_mediated_decay Mus_musculus 1e-25 121
ENSMUST00000154889 Cpne1-012 protein_coding Mus_musculus 1e-24 117
ENSMUST00000153634 Cpne1-010 protein_coding Mus_musculus 1e-24 117
ENSMUST00000131377 Rbm12-004 protein_coding Mus_musculus 1e-24 117
ENSMUST00000147627 Cpne1-009 nonsense_mediated_decay Mus_musculus 8e-22 108
ENSMUST00000079312 Cpne1-008 protein_coding Mus_musculus 8e-22 108

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