C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RanBP-type and C3HC4-type zinc finger containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475269 RBCK1-001 ENSG00000125826 9606 + 20:408078-410764 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000475269
Transcript ID Bladder Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000475269 0.684±0.00 8.909±0.00 6.764±4.67 8.464±0.00 16.104±15.36 9.621±0.00 25.414±17.54 13.195±1.18 12.114±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0001 VISTA 20:23407-624368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129590 Rbck1-004 processed_transcript Mus_musculus 0 230
ENSMUST00000109847 Rbck1-001 protein_coding Mus_musculus 0 230
ENSMUST00000028964 Rbck1-002 protein_coding Mus_musculus 0 224

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