C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RanBP-type and C3HC4-type zinc finger containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129590 Rbck1-004 ENSMUSG00000027466 10090 - 2:152326404-152332384 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000129590
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000129590 23.318±0.00 25.610±0.00 9.043±0.26 3.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356286 RBCK1-010 protein_coding Homo_sapiens 0 339
ENST00000382214 RBCK1-005 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000400245 RBCK1-003 processed_transcript Homo_sapiens 0.0000000000003 81
ENST00000411647 RBCK1-004 protein_coding Homo_sapiens 0 333
ENST00000415942 RBCK1-011 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000475269 RBCK1-001 protein_coding Homo_sapiens 0 230

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