C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | optic atrophy 1 (autosomal dominant) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000475899  |
OPA1-015 |
ENSG00000198836 |
9606 | + |
3:193637216-193644151  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000N8 | CIL_0000N8_0001 | CGP | 3:193402077-193697823 |
| CIL_0008CV | CIL_0008CV_0001 | VISTA | 3:193471570-194073544 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000160153
|
Opa1-005 | retained_intron | Mus_musculus | 0 | 848 |
|
ENSMUST00000038867
|
Opa1-003 | protein_coding | Mus_musculus | 0 | 848 |
|
ENSMUST00000161186
|
Opa1-008 | protein_coding | Mus_musculus | 0 | 848 |
|
ENSMUST00000160475
|
Opa1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 848 |
|
ENSMUST00000159036
|
Opa1-004 | retained_intron | Mus_musculus | 0 | 848 |
|
ENSMUST00000160597
|
Opa1-001 | protein_coding | Mus_musculus | 0 | 848 |
|
ENSMUST00000162240
|
Opa1-007 | protein_coding | Mus_musculus | 0 | 409 |
