C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: optic atrophy 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160153 Opa1-005 ENSMUSG00000038084 10090 + 16:29579392-29651879 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeENSMUST00000160153
Transcript ID Adipose
ENSMUST00000160153 1.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N8 CIL_0000N8_0002 CGP 16:29395853-29654884
CIL_0008CV CIL_0008CV_0002 VISTA 16:29419360-30021162

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361150 OPA1-201 protein_coding Homo_sapiens 0 1631
ENST00000361510 OPA1-202 protein_coding Homo_sapiens 0 1631
ENST00000361715 OPA1-203 protein_coding Homo_sapiens 0 1631
ENST00000361828 OPA1-204 protein_coding Homo_sapiens 0 1631
ENST00000361908 OPA1-001 protein_coding Homo_sapiens 0 1631
ENST00000392438 OPA1-002 protein_coding Homo_sapiens 0 1997
ENST00000445863 OPA1-009 protein_coding Homo_sapiens 0 538
ENST00000475899 OPA1-015 retained_intron Homo_sapiens 0 848
ENST00000495476 OPA1-007 retained_intron Homo_sapiens 0 390
ENST00000497189 OPA1-013 retained_intron Homo_sapiens 0 599

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