C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36a pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476382 RPL36AP26-001 ENSG00000235828 9606 - 7:15701435-15701752 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000476382
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000476382 0.438±0.00 0.718±0.00 0.315±0.00 0.778±0.00 1.733±0.00 0.047±0.00 0.617±0.00 0.471±0.00 1.618±0.00 1.568±0.00 0.414±0.22 0.361±0.00 0.502±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027F CIL_00027F_0002 CGP 7:15611212-16421322

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 409
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 407
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 405
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000169457 Rpl36a-006 retained_intron Mus_musculus 0 207

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