C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginine-glutamic acid dipeptide (RE) repeats
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476556 RERE-003 ENSG00000142599 9606 - 1:8354093-8423666 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0001 VISTA 1:7770379-8371827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006607 TAS NLS-bearing protein import into nucleus
GO:0007275 IEA multicellular organismal development
GO:0008267 TAS poly-glutamine tract binding
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105680 Rere-003 protein_coding Mus_musculus 0 4626
ENSMUST00000105682 Rere-001 protein_coding Mus_musculus 0 4626
ENSMUST00000136646 Rere-007 protein_coding Mus_musculus 0 1066

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