C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: arginine glutamic acid dipeptide (RE) repeats
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136646 Rere-007 ENSMUSG00000039852 10090 + 4:150617266-150619828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000136646
Transcript ID Placenta
ENSMUST00000136646 25.924±2.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MK CIL_0003MK_0002 CGP 4:150236721-150621966

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IPI histone deacetylase complex
GO:0005515 IPI protein binding
GO:0006338 IPI chromatin remodeling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337907 RERE-001 protein_coding Homo_sapiens 0 1066
ENST00000377464 RERE-002 protein_coding Homo_sapiens 0 1066
ENST00000400907 RERE-015 protein_coding Homo_sapiens 0 745
ENST00000400908 RERE-014 protein_coding Homo_sapiens 0 1066
ENST00000476556 RERE-003 protein_coding Homo_sapiens 0 1066
ENST00000505225 RERE-018 protein_coding Homo_sapiens 0 191

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