C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroligin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476589 NLGN3-004 ENSG00000196338 9606 + X:71153456-71171199 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000476589
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000476589 0.439±0.00 0.256±0.00 5.448±3.84 0.197±0.03 0.053±0.00 0.202±0.00 0.299±0.00 0.057±0.00 0.163±0.08 0.999±0.54 0.137±0.08 3.292±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057X CIL_00057X_0001 CGP X:71118556-71171201
CIL_00057N CIL_00057N_0001 CGP X:71144831-71225516

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151528 Nlgn3-004 protein_coding Mus_musculus 0 3784
ENSMUST00000065858 Nlgn3-001 protein_coding Mus_musculus 0 3783
ENSMUST00000118111 Nlgn3-002 protein_coding Mus_musculus 0 3783
ENSMUST00000130555 Nlgn3-003 protein_coding Mus_musculus 0 1587
ENSMUST00000144860 Nlgn3-007 processed_transcript Mus_musculus 0 555
ENSDART00000125284 nlgn2a-202 protein_coding Danio_rerio 0 551
ENSDART00000112978 nlgn2a-201 protein_coding Danio_rerio 0 544

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