C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476648 SNX5-011 ENSG00000089006 9606 - 20:17942138-17954024 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverMuscleTestisENST00000476648
Transcript ID Adipose Bladder Breast Heart Liver Muscle Testis
ENST00000476648 13.956±0.00 7.807±0.00 15.904±7.19 2.270±0.00 6.789±0.00 5.797±0.00 13.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694
CIL_0002MX CIL_0002MX_0001 CGP 20:17693672-17968980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028909 Snx5-003 protein_coding Mus_musculus 0 1064
ENSMUST00000110030 Snx5-001 protein_coding Mus_musculus 0 1064
ENSMUST00000156936 Snx5-005 processed_transcript Mus_musculus 0 239
ENSMUST00000124389 Snx5-008 processed_transcript Mus_musculus 3e-37 159

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