C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477094 ABCB5-006 ENSG00000004846 9606 + 7:20647330-20651696 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungOvaryPlacentaENST00000477094
Transcript ID Bladder Liver Lung Ovary Placenta
ENST00000477094 0.491±0.00 1.909±0.00 0.105±0.00 0.038±0.01 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UH CIL_0007UH_0001 VISTA 7:20489771-21090788
CIL_0007YM CIL_0007YM_0001 VISTA 7:20493009-21094283
CIL_0007Z1 CIL_0007Z1_0001 VISTA 7:20499224-21100776

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035515 Abcb5-001 protein_coding Mus_musculus 0 505
ENSMUST00000136064 Ctrc-003 processed_transcript Mus_musculus 0.0000003 60
ENSMUST00000053760 Utp14b-001 protein_coding Mus_musculus 0.0000009 58

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