C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477528 HDAC6-002 ENSG00000094631 9606 + X:48802055-48824982 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryTestisENST00000477528
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000477528 1.915±0.00 0.736±0.00 0.548±0.00 1.432±0.32 0.630±0.00 1.658±0.00 1.562±0.00 1.280±0.00 6.635±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033501 Hdac6-201 protein_coding Mus_musculus 0 2121
ENSMUST00000145675 Hdac6-003 protein_coding Mus_musculus 0 2121
ENSMUST00000115642 Hdac6-001 protein_coding Mus_musculus 0 2121
ENSMUST00000137499 Hdac6-002 retained_intron Mus_musculus 0 1277
ENSMUST00000133349 Hdac6-005 protein_coding Mus_musculus 0 379
ENSMUST00000154200 Hdac6-006 retained_intron Mus_musculus 0 351
ENSMUST00000156127 Hdac6-007 retained_intron Mus_musculus 0 228

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