C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: debranching RNA lariats 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477557 DBR1-004 ENSG00000138231 9606 - 3:138163349-138174859 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000477557
Transcript ID Ovary
ENST00000477557 1.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YL CIL_0007YL_0001 VISTA 3:137620069-138221266
CIL_00036L CIL_00036L_0002 CGP 3:138161012-138298389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066650 Dbr1-001 protein_coding Mus_musculus 0 436
ENSMUST00000148987 Dbr1-002 protein_coding Mus_musculus 0 429
ENSMUST00000136884 Dbr1-006 protein_coding Mus_musculus 0 265
ENSMUST00000156035 Dbr1-003 protein_coding Mus_musculus 0 244
ENSMUST00000138002 Dbr1-004 protein_coding Mus_musculus 0 231

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