C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cerebral cavernous malformation 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477605 CCM2-005 ENSG00000136280 9606 + 7:45067636-45076437 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000477605
Transcript ID Colon
ENST00000477605 0.459±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SD CIL_0000SD_0001 CGP 7:44962662-45076469
CIL_0000S8 CIL_0000S8_0001 CGP 7:44999475-45088914

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109721 Ccm2-201 protein_coding Mus_musculus 0 1024
ENSMUST00000109722 Ccm2-002 protein_coding Mus_musculus 0 1024
ENSMUST00000000388 Ccm2-001 protein_coding Mus_musculus 0 1024
ENSMUST00000160633 Ccm2-006 protein_coding Mus_musculus 0 329
ENSMUST00000161667 Ccm2-007 retained_intron Mus_musculus 0 268
ENSMUST00000161501 Ccm2-004 nonsense_mediated_decay Mus_musculus 0 202

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