C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478522 SNRPB2-003 ENSG00000125870 9606 + 20:16730029-16732468 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000478522
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000478522 5.150±0.00 2.475±0.00 7.081±0.00 6.340±0.00 3.049±0.00 3.484±0.07 4.903±0.00 4.374±0.00 4.721±0.00 3.155±1.36 8.741±0.81 6.911±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DH CIL_0002DH_0001 CGP 20:16729961-16770062

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139114 Snrpb2-002 retained_intron Mus_musculus 0 366
ENSMUST00000127760 Snrpb2-005 retained_intron Mus_musculus 0 359
ENSMUST00000126763 Snrpb2-004 protein_coding Mus_musculus 0 359
ENSMUST00000008477 Snrpb2-001 protein_coding Mus_musculus 0 359
ENSMUST00000118008 Gm12697-001 processed_pseudogene Mus_musculus 0 268

Loading