C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478867 RP11-435F17.3-001 ENSG00000241889 9606 + 3:113885298-113886031 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000478867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000478867 0.288±0.00 0.428±0.00 0.678±0.00 0.227±0.00 0.185±0.00 0.217±0.00 0.119±0.02 0.260±0.00 0.045±0.00 0.166±0.00 0.152±0.00 0.454±0.29 0.136±0.00 0.848±0.73

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108593 Ctdnep1-001 protein_coding Mus_musculus 0 979
ENSMUST00000165001 Gm6872-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000141623 Ctdnep1-005 protein_coding Mus_musculus 0 732
ENSMUST00000131531 Ctdnep1-002 retained_intron Mus_musculus 0 630
ENSMUST00000138246 Ctdnep1-004 retained_intron Mus_musculus 0 219
ENSMUST00000152226 Ctdnep1-003 processed_transcript Mus_musculus 0 215

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