C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6872
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165001 Gm6872-001 ENSMUSG00000091004 10090 - 7:41668609-41669308 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000165001
Transcript ID Testis
ENSMUST00000165001 1.082±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000029889 ctdnep1a-001 protein_coding Danio_rerio 0 374
ENST00000318988 CTDNEP1-003 protein_coding Homo_sapiens 0 881
ENST00000478867 RP11-435F17.3-001 processed_pseudogene Homo_sapiens 0 782
ENST00000506083 CTC-250P20.2-001 processed_pseudogene Homo_sapiens 0 680
ENST00000570380 CTDNEP1-008 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000570484 CTDNEP1-011 retained_intron Homo_sapiens 0 196
ENST00000570760 CTD-2545G14.7-001 nonsense_mediated_decay Homo_sapiens 2e-29 134
ENST00000570828 CTDNEP1-012 protein_coding Homo_sapiens 0 785
ENST00000571409 CTDNEP1-006 protein_coding Homo_sapiens 0 429
ENST00000572043 CTDNEP1-007 protein_coding Homo_sapiens 0 791
ENST00000573600 CTDNEP1-002 protein_coding Homo_sapiens 0 881
ENST00000574205 CTDNEP1-004 nonsense_mediated_decay Homo_sapiens 0 881
ENST00000574322 CTDNEP1-001 protein_coding Homo_sapiens 0 881
ENST00000575783 CTDNEP1-005 protein_coding Homo_sapiens 0 817
ENST00000576613 CTDNEP1-009 protein_coding Homo_sapiens 0 438
ENST00000577138 RP1-4G17.5-001 nonsense_mediated_decay Homo_sapiens 0 270

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