C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor interactor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479037 TRIP12-002 ENSG00000153827 9606 - 2:229807319-229922009 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungMuscleOvaryENST00000479037
Transcript ID Bladder Colon Lung Muscle Ovary
ENST00000479037 5.701±0.00 5.416±0.00 11.775±0.00 3.489±0.00 7.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087W CIL_00087W_0001 VISTA 2:229259676-229860905
CIL_00076T CIL_00076T_0001 CGP 2:229357629-229923239
CIL_00076Q CIL_00076Q_0001 CGP 2:229763838-230013109

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027421 Trip12-201 protein_coding Mus_musculus 0 3707
ENSMUST00000186894 Trip12-004 protein_coding Mus_musculus 0 3707
ENSMUST00000186465 Trip12-001 protein_coding Mus_musculus 0 3600
ENSMUST00000186648 Trip12-006 protein_coding Mus_musculus 0 3559
ENSMUST00000189496 Trip12-005 protein_coding Mus_musculus 0 1567
ENSMUST00000185909 Trip12-003 nonsense_mediated_decay Mus_musculus 0 1182
ENSMUST00000190067 Trip12-002 protein_coding Mus_musculus 0 760
ENSMUST00000190464 Trip12-018 protein_coding Mus_musculus 0 490
ENSMUST00000187818 Trip12-011 protein_coding Mus_musculus 0 435
ENSMUST00000190474 Trip12-010 retained_intron Mus_musculus 0 209
ENSDART00000145863 trip12-001 protein_coding Danio_rerio 0 200
ENSDART00000138552 trip12-002 protein_coding Danio_rerio 0 196

Loading