C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S10 pseudogene 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480396 RPS10P28-001 ENSG00000243167 9606 + 19:42670005-42670816 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyMuscleOvaryPlacentaENST00000480396
Transcript ID Adipose Adrenal Brain Kidney Muscle Ovary Placenta
ENST00000480396 0.374±0.00 0.040±0.00 0.044±0.00 0.042±0.00 0.035±0.00 0.196±0.00 0.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_000A CGP 19:42507304-42740384
CIL_0003UJ CIL_0003UJ_000F CGP 19:42580241-42740569

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 566
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 566
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 566
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 516
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 468
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 468
ENSMUST00000120308 Rps10-ps4-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 331

Loading