C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, L type, alpha 1F subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480889 CACNA1F-006 ENSG00000102001 9606 - X:49222258-49223143 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000480889
Transcript ID Liver Ovary
ENST00000480889 0.369±0.00 0.070±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144522 Cacna1f-006 retained_intron Mus_musculus 0 575
ENSMUST00000141634 Cacna1f-004 retained_intron Mus_musculus 0 573
ENSMUST00000115725 Cacna1f-002 protein_coding Mus_musculus 0 573
ENSMUST00000133637 Cacna1f-005 protein_coding Mus_musculus 0 573
ENSMUST00000115726 Cacna1f-001 protein_coding Mus_musculus 0 573
ENSMUST00000155090 Cacna1f-003 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000100348 Cacna1b-201 protein_coding Mus_musculus 6e-37 158
ENSMUST00000114447 Cacna1b-003 protein_coding Mus_musculus 6e-37 158
ENSMUST00000041342 Cacna1b-002 protein_coding Mus_musculus 6e-37 158
ENSMUST00000102939 Cacna1b-004 protein_coding Mus_musculus 6e-37 158
ENSMUST00000070864 Cacna1b-001 protein_coding Mus_musculus 6e-37 158

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