C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480961 CTSA-009 ENSG00000064601 9606 + 20:45893988-45895250 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryENST00000480961
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary
ENST00000480961 54.075±0.00 21.322±0.00 45.828±0.00 34.727±0.00 6.814±0.00 29.742±0.00 17.132±0.00 20.567±0.00 25.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0001 CGP 20:45886489-45891287
CIL_0006GL CIL_0006GL_0001 CGP 20:45888625-45898820
CIL_0006IQ CIL_0006IQ_0002 CGP 20:45890144-45912155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017904 Ctsa-201 protein_coding Mus_musculus 0 366
ENSMUST00000103092 Ctsa-001 protein_coding Mus_musculus 0 366
ENSMUST00000103093 Ctsa-011 protein_coding Mus_musculus 0 366
ENSMUST00000133077 Ctsa-005 retained_intron Mus_musculus 4e-34 148
ENSMUST00000143780 Ctsa-004 protein_coding Mus_musculus 2e-21 106

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